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Pandemic Mutual - Observations and Ideas regarding the Pandemic
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Apr 5: Variants starting to impact case counts

Ehmagerd Vehriernts

Variants had occurred throughout but there was a marked increase in concern in these that correlated strongly with a reduction of asinine American tweets. Was the news just looking for something new to panic about?

Probably.

But of the variants we’ve heard about the most successful one appears to be the UK variant.

Epidemiologists can track individual cases and their knock-on effects and warned early on that the UK variant was more contagious. I wasn’t able to confirm this in my reports since the total variant counts were only a fraction of the totals, and could just as easily be noise. So I’ve been waiting until something can be seen.

Welp, today is that day. I have added trend lines for the UK variant with points near the start and points close to now. This second sloped line is steeper than the base trend, confirming that yes the variants spread faster.

Additionally, in many places the variant is now the majority of new cases and the effect of the faster growth can now be seen in the line showing Active Cases. Notice how the variant trend line starts to nudge up that main line in Alberta, for example.

Frustrating as it is, and as goddamn exhausted as we all are about all of this *gestures broadly but vaguely with arms*, the BC PHO is right to have enacted new circuit breaker measures. We are presently about to see faster growth, likely due to the number of variants approaching the majority of cases.

Vaccinations are still not widely available in BC so this kind of just kicks the can down the road, but the underlying goal of BC PHO’s orders are to soften the shock on hospitals and other resources.

There’s a strong effect of that variant trend line in Alberta, the government of Alberta has announced a return to Step 1 measures. A good decision at this point.

Ontario has recently implemented stricter measures is mulling new stay-at-home orders. This seems like the right thing to do. The trend line is far below the cases line and yet cases are increasing similar to other regions. I would guess this indicates that the data I have on variants in Ontario is missing a lot of cases.

Finland’s growth seems to be unaffected by variants, hopefully this continues.

Sweden had the UK variant for a while and its growth seems slow. I’m not sure if this is because of a lack of genomic sequencing or what.

Belgium’s cases are growing again now that variants are likely to be close to all of the new active cases.

UK is well past the predicted 100% variant point, and is effectively all the UK variant now as far as I can tell.

They’ve had lockdown measures since January now and started gradually easing them in March. The gradual easing makes sense as they are likely at a steady state now and can monitor how each step of easing affects the NHS, taking care to not break the hospitals.

British Columbia

Metro Vancouver

Canada

World

Base Growth

Canada

World

Despite a nearly 100% share of the UK variant, UK’s cases are continuing to decline and lockdown measures are easing. Hopefully vaccinations keep pace.

USA

Large counties across the US have shifted to be above r=1 again, let’s hope vaccinations outpace further growth.

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Weekly Update Front Page Insights

Feb 12: BC has more Active Cases than Alberta but Why Won’t the News Say It?

Dunking on Alberta

We invite you to reflect upon the coverage of Alberta in December now that BC has overtaken it in cases per capita. Remember when British Columbians were calling to close the borders?

The calls to close the border are the same but now it’s because of variants. No matter what the facts on the ground, journalists will find some way to exploit inter-provincial rivalries for clicks.

Alberta vs BC:

November prediction: BC overtakes Alberta in raw and per-million active cases in January.
January 15: prediction adjusted to be by mid February (two weeks later, to match result of AB vs ON)
January 22: mid February seems possible still
February 12: our prediction has come true

Alberta vs Ontario:

November prediction: Ontario active cases per million surpass Alberta by the end of December.
Result: Prediction came true two weeks later, mid January.

British Columbia

Metro Vancouver

Starting February Vancouver Coastal started to get its act together. Fraser, while still slowing overall, is slowing less aggressively than before Jan 24.

Canada

World

Base Growth

Canada

Canada’s actions after Jan 17 have resulted in a steady decline, keep it up!

BC held levels over the holidays, increasing a tad in mid January, and starting to cool again.

Alberta continues to hold on its trend of reduction.

The measures in Ontario and Quebec continue to be effective.

The maritime provinces have done a good job changing behaviours, cases are way down. Quebec has not had much luck slowing the spread. There’s a slight turn after the new year but it remains to be seen if it holds.

Saskatchewan has stemmed the growth since new years. Keep it up!

World

UK’s lockdown continues to be effective. They are conemplating easing it, it will be interesting to see how that goes.

USA

Large counties across the US continue to stay under R=1.

Hawaii’s Big Island has got growth under control, returning back to R=1 after a week of high spread.

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Weekly Update Front Page Insights

Springtime for COVID and Jan 22: Weekly Update

Seasonality

Cases started to grow in southern hemisphere countries around November, late spring. This corresponds to us northerners in March, except with a larger local and global base case load to start off from.

Unlike in the north, cases have continued to grow since then.

We weren’t sold on seasonality before, but seeing the sustained growth in the south’s Spring and Summer we will offer a prediction that this portends accelerated northern activity in starting March 2021.

British Columbia

###

Metro Vancouver

Fraser Health continues to keep R below 1, however citizens in Vancouver Coastal got lax at New Years, resulting in a blip taking around 2 weeks to cool again.

Canada

World

Base Growth

Canada

Canadian habits appear to have started to change since Christmas, both nationally and by province. Here’s hoping it sticks!

BC held levels over the holidays, increasing a tad in mid January, and starting to cool again.

Alberta continues to hold on its trend of reduction.

The lockdown measures implemented over the holidays in Ontario are starting to show effect. Quebec also turned a corner during the holidays. Hang in there, make those changes permanent!

The maritime provinces have done a good job changing behaviours, cases are way down. Quebec has not had much luck slowing the spread. There’s a slight turn after the new year but it remains to be seen if it holds.

Saskatchewan has stemmed the growth since new years. Keep it up!

World

UK’s lockdown appears to be calming the effect of the new variant.

Dunking on Alberta

Alberta vs Ontario:

November prediction: Ontario active cases per million surpass Alberta by the end of December.
Result: Prediction came true two weeks later, mid January.

Alberta vs BC:

November prediction: BC overtakes Alberta in raw and per-million active cases in January.
January 15: prediction adjusted to be by mid February (two weeks later, to match result of AB vs ON)
January 22: mid February seems possible still

USA

Behaviours across the United States are improving, the majority of large counties are now below R=1. Keep it up and those case counts will slowly start to simmer away.

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Weekly Update Front Page

Jan 15: Weekly Update

British Columbia

Fraser Health is the only region with declining numbers now. Don’t get lazy everybody else.

Not much difference between the ages:

Metro Vancouver

Fraser Health has done a remarkable job of keeping R below 1 for a month and a half now. Keep it up.

They have more cases than Vancouver Coastal, but the numbers aren’t what’s difficult, the behaviours are. Keeping that line below R=1 takes sacrifice and commitment.

Canada

World

There has been controversy in Japan about their handling of the pandemic, as seen in headlines around the world. Chances are they’re doing a much better job than you though, they just have higher standards.

If there’s anything to be learned from that journalism it’s that:

Europe has the most cases per capita, with North America right behind it. Asian countries vary across the board. Africa continues to do great. Oceania is doing the best, likely due to islands being easier to control.

Czechia has the most cases per capita anywhere, followed by the UK, US, and not far behind…. Sweden.

The herd immunity strategy did not work out for them.

Base Growth

Canada

BC slowed the spread after whole-province restrictions came in to effect in November (I don’t know if this is causal).

Alberta turned a corner just as Hanukah started and has kept course since then.

Ontario’s just truckin’, man. Lockdown measures implemented over the holidays did not appear to help.

Quebec has not had much luck slowing the spread. There’s a slight turn after the new year but it remains to be seen if it holds.

Saskatchewan held off for a bit but then picked right back up at the same growth rate as before.

World

China is doing a decent job of supporting our Base Growth hypothesis. Active Cases occasionally climb and are managed back down but have a hard time getting below the trend line at slope R1.1.

A number of other countries have also failed to break through Base Growth.

Other countries have managed to change the fundamental behaviours that were driving spread:

Dunking on Alberta

In November, we predicted that active cases per million in Ontario would surpass Alberta by the end of December. This prediction was off by a couple of weeks but has shown itself to be correct.

We also predicted that BC would overtake Alberta in raw and per-million active cases in January. There is a chance this might still occur, though we will adjust that prediction to be by mid February (if current trends continue).

Per Capita

USA

While Thanksgiving did not have a negative impact on most US counties, Christmas returned them to the track they were on before. Nonetheless, it wasn’t a big change from the general trend going back to April and May.

By and large Americans have continued doing the same things before Thanksgiving and after Christmas.

L.A. and San Diego are tied on active cases per million. Most of the other tracked regions are hovering in a similar grouping just under 10k/1M (1%) of the population having an active case.

Hawaii’s data dropped over Kalikimaka and that’s why the graph looks discontinuous, this also affects the R calculation.

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Front Page Weekly Update

Dec 24: Weekly Update // Everything is Bigger in Texas

British Columbia

Metro Vancouver

Canada

World

Base Growth

Canada

World

Alberta

Per Capita

We predicted Ontario would exceed Alberta in Per-Million cases, that has not yet materialized however it might not be far off if AB’s decline continues and if Ontario’s Boxing Day lockdown is slow to take effect.

USA

Big increases have been seen throughout Texas starting around December 13th.

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Front Page Insights

US Thanksgiving: Thankfully Better than Expected

In recent months we’ve learned that a lot of the spread of this virus is occurring in residential gatherings. Compliance has been in line with no-parties messaging in Canada and many other places, less so in the USA.

Americans and Canadians alike were concerned about US Thanksgiving: the most popular holiday for Americans to gather. The abundance of family get-togethers, of urban kids traveling back to rural areas to visit family, a great airing of gravy-moistened opinions, all increase the risk of problematic disease spread.

Now that we’re over 2 weeks past November 26, anybody who was exposed then will have run their course with the virus. How did America fare?

Pretty Decently

In each of the following graphs the red vertical line indicates US Thanksgiving.

It’s remarkable how R-value has, for the most part, decreased in in large counties. The one outlying red line is Riverside County (CA) which includes Palm Springs and (ironically) the Los Angeles suburb of Corona.

The slowing rate of growth can be seen in the gradual shallowing of the number of Active Cases:

Tracked Regions

Of our tracked regions only Kittitas County (WA), San Francisco, and Houghton County (MI) saw the rate of growth increase after Thanksgiving.

The remaining 8 tracked areas didn’t have an increase from Thanksgiving. Three of them even saw a decrease in cases.

Only Hawaii’s Big Island saw a notable increase in mortality.

Kittitas County, Washington fared badly, seeing R increase from 1.5 infections per case to over 2.5.

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Front Page Weekly Update

Dec 12: Weekly Update

British Columbia

Metro Vancouver

Canada

World

Base Growth

Canada

World

Alberta vs the ROC

USA

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Weekly Update Front Page

Dec 5: Weekly Update

British Columbia

Metro Vancouver

World

Base Growth

Canada

World

Base Growth was held off in Finland for a month but continued with the same growth rate after the hiatus.

World R

U.S.A.

So far there’s no drastic impact from US Thanksgiving, let’s hope this continues to be the case.

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Insights

Global Active Cases

Of our tracked countries, USA leads the pack in Active Cases, however it is also a large region.

On a per-million basis USA is still high up but a number of non-tracked countries exceed it. Sweden, Italy, Hungary, and USA have roughly the same Active Cases per Million.

Alberta has twice the Active Case per Million than BC, Canada, and Quebec.

How do the Continents Compare?

Grouping by continents we see that Europe has the most active cases per million.

Africa and Oceania, on the other hand, are doing an excellent job of managing case counts.

The two countries in Oceania that break the trend of low cases are Guam (4,883/M) and French Polynesia (8556/M). Remarkable how even these protectorates across the entire planet have Active Cases per Million similar to their colonizers.

North America, South America, and Asia vary more widely among the member countries.

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Weekly Update Front Page

Nov 29: Weekly Update

British Columbia

It appears as if the recent measures have slowed the spread in the Metro Vancouver region. We haven’t sunk below R=1 though, but better than.

Schools

Vancouver did well with schools, R continued to decrease in September after schools opened, and stayed under R=1 until the last week of October. The verdict is out on schools, but it’s not a categorical bad either.

Metro Vancouver Cool-down Tracker

Province-wide

Regions

Alberta

It may end up that I predicted the Base Growth line incorrectly, with Alberta starting to do worse after Oct 4th. That being said, the slope of their November Active Cases is less steep than BC, so don’t go throwing any stones.

Other Provinces

Some provinces and territories have too few cases to graph well, we’ll work on these but in the mean time those graphs aren’t included.

[2020-11-30 Territory graphs fixed and uploaded, no provinces or territories missing anymore:]

Base Growth

Tracking our base growth theory, it’ll be interesting to see how regions fare after Lockdowns 2.0. We haven’t found what changed recently in Finland or China that caused the plateau and subsequent rise, but it is interesting to see the rises matching that base growth slope.

World

Czechia

Recent articles discussing school impacts mentioned the Czech Republic and the correlations there do seem to point to spreading in schools there (the same correlation does not exist in other regions):

Cases and R went up almost immediately when schools opened. R took two weeks to cool off once schools closed, 5 weeks for active cases to subside (this doesn’t seem like a strong correlation. Schools opening again in mid-November correlates with R stopping its decrease and flattening out. Not exactly a home-dunk but not implausible that schools are without impact either.

Hungary

Hungary’s second state of emergency in early November slowed R to R=1 but didn’t shrink the active case load either. Stronger measures may be needed.

Anecdotal reports are of police being very proactive in enforcing mask laws. While satisfying to hear about, the expenditure of social capital on such an effort, without meaningfully reducing active case numbers might be a short-sighted investment.

Everywhere else

U.S.A.

R was already on the climb before American Thanksgiving. Sadly, things might get rough in December.

Chicago and Michigan

They are having a rough go of it right now, both recently having 100,000 active cases.